Arabidopsis links


general  -   QTLs  -   expression  -   rice

general

  • GeneOntology and Arabidopsis-specific GO
  • UK CropNet Arabidopsis Genome Resource (AGR)
  • Arabidopsis Genome Initiative (AGI)
  • TAIR search
  • MATDB MIPS A thaliana database
  • GARNET
  • Nottingham Arabidopsis Stock Centre
  • RARGE-RIKEN Arabidopsis Genome Encyclopedia
  • SPRIG Specialized Plant Resources for Informatics and Genomics
  • PlantOntology
  • AraCyc, Arabidopsis pathways

    QTLs

  • naturalvariation.org links for Arabidopsis
  • R/QTL
  • Genetic linkage analysis resources at Rockefeller including a list of software
  • Vivisimo search for QTL
  • QTL references

    expression data

  • CATMA
  • Many links to microarray technology and papers
  • Papers on microarray data analysis
  • Search for microarrays in the Bio Notebook
  • NCBI's Gene Expression Omnibus
  • DNA Microarrays page with good papers listing
  • Speed's microarray data analysis group
  • GeneX-Lite open source gene epression database
  • Microarray resources including 2HAPI

    rice

  • Rice Genome Research Program
  • The Program for Rice Genome Research (PRGR)
  • International Rice Information System


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